Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | DV20_04765 | Not Available | Negative | 957290 - 957907 | 21994.3 |
| gcn5 family acetyltransferase | DV20_04770 | Not Available | Positive | 957983 - 958432 | 16069.0 |
| hypothetical protein | DV20_04775 | Not Available | Positive | 958711 - 959019 | 11435.6 |
| mfs transporter | DV20_04780 | Not Available | Positive | 959114 - 960508 | 47204.1 |
| peptidase | DV20_04785 | Not Available | Positive | 960591 - 962084 | 53253.8 |
| hnh endonuclease | DV20_04790 | Not Available | Positive | 962183 - 963418 | 44480.4 |
| hypothetical protein | DV20_04795 | Not Available | Negative | 963688 - 963912 | 8399.29 |
| gnat family acetyltransferase | DV20_04800 | Not Available | Positive | 964034 - 964474 | 16254.1 |
| hypothetical protein | DV20_04805 | Not Available | Negative | 964478 - 965194 | 24984.2 |
| hypothetical protein | DV20_04810 | Not Available | Positive | 965490 - 966659 | 38962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.