Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-dependent synthetase | DV20_04715 | Not Available | Positive | 947726 - 949249 | 55282.6 |
| epoxide hydrolase | DV20_04720 | Not Available | Negative | 949246 - 950352 | 42028.4 |
| pyrimidine reductase | DV20_04725 | Not Available | Negative | 950349 - 950894 | 19504.2 |
| molybdopterin oxidoreductase | DV20_04730 | Not Available | Negative | 950937 - 953240 | 83707.1 |
| f420-dependent methylene-tetrahydromethanopterin reductase | DV20_04735 | Not Available | Negative | 953237 - 954262 | 36579.6 |
| cyclase | DV20_04740 | Not Available | Negative | 954259 - 954750 | 18734.2 |
| hxlr family transcriptional regulator | DV20_04745 | Not Available | Negative | 954813 - 955316 | 19323.1 |
| gcn5 family acetyltransferase | DV20_04750 | Not Available | Negative | 955349 - 955924 | 20954.8 |
| cupin | DV20_04755 | Not Available | Negative | 955935 - 956324 | 14338.0 |
| arac family transcriptional regulator | DV20_04760 | Not Available | Positive | 956368 - 957333 | 34995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.