Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-amino-6-(5-phosphoribosylamino)uracil reductase | DV20_04665 | Not Available | Negative | 939255 - 939992 | 25727.0 |
| dihydropteroate synthase | DV20_04670 | Not Available | Negative | 939989 - 940567 | 19300.2 |
| hypothetical protein | DV20_04675 | Not Available | Negative | 940681 - 940980 | 10978.3 |
| hypothetical protein | DV20_04680 | Not Available | Positive | 941193 - 942101 | 31062.7 |
| aminotransferase | DV20_04685 | Not Available | Positive | 942123 - 943316 | 44489.5 |
| aminoglycoside phosphotransferase | DV20_04690 | Not Available | Positive | 943328 - 944254 | 33962.6 |
| tetr family transcriptional regulator | DV20_04695 | Not Available | Positive | 944317 - 945006 | 24617.2 |
| f420-dependent oxidoreductase | DV20_04700 | Not Available | Positive | 945032 - 945880 | 30137.9 |
| hemerythrin | DV20_04705 | Not Available | Negative | 945881 - 946609 | 27609.3 |
| hypothetical protein | DV20_04710 | Not Available | Negative | 946819 - 947664 | 30818.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.