Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator | DV20_04555 | Not Available | Negative | 917744 - 918100 | 12445.7 |
| hypothetical protein | DV20_04560 | Not Available | Negative | 918252 - 918509 | 9084.97 |
| atp-dependent dna helicase | DV20_04565 | Not Available | Negative | 918719 - 920803 | 75698.1 |
| membrane protein | DV20_04570 | Not Available | Positive | 920869 - 921597 | 26421.9 |
| membrane protein | DV20_04575 | Not Available | Negative | 921657 - 922142 | 16786.5 |
| glutamine synthetase | DV20_04580 | Not Available | Positive | 922316 - 923740 | 53188.3 |
| thioesterase | DV20_04585 | Not Available | Negative | 923811 - 924236 | 15623.9 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | DV20_04590 | Not Available | Negative | 924251 - 927226 | 106723.0 |
| phosphate transporter | DV20_04595 | Not Available | Negative | 927256 - 928389 | 38102.9 |
| glutamine amidotransferase | DV20_04600 | Not Available | Negative | 928484 - 929233 | 26647.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.