Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_04505 | Not Available | Positive | 907902 - 908453 | 19173.7 |
| signal protein pdz | DV20_04510 | Not Available | Negative | 908450 - 909556 | 38528.9 |
| hydrolase | DV20_04515 | Not Available | Positive | 909646 - 911007 | 48584.1 |
| metal-dependent hydrolase | DV20_04520 | Not Available | Negative | 911512 - 912021 | 19242.1 |
| thiamin biosynthesis protein | DV20_04525 | Not Available | Positive | 912252 - 913298 | 37458.4 |
| abc transporter atp-binding protein | DV20_04530 | Not Available | Positive | 913359 - 914699 | 48846.5 |
| hypothetical protein | DV20_04535 | Not Available | Positive | 914862 - 915749 | 32030.6 |
| hypothetical protein | DV20_04540 | Not Available | Negative | 915901 - 916086 | 6872.11 |
| methylase | DV20_04545 | Not Available | Negative | 916083 - 916949 | 30304.4 |
| hypothetical protein | DV20_04550 | Not Available | Negative | 917493 - 917747 | 9953.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.