Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 75474 - 75548 | Not Available |
| hypothetical protein | DV20_00365 | Not Available | Negative | 76018 - 76281 | 10253.0 |
| acyl-coa synthetase | DV20_00370 | Not Available | Negative | 76281 - 78347 | 74573.4 |
| transcriptional regulator | DV20_00375 | Not Available | Negative | 78652 - 79590 | 33539.4 |
| glyoxalase | DV20_00380 | Not Available | Positive | 79778 - 80170 | 14704.4 |
| hypothetical protein | DV20_00385 | Not Available | Negative | 80124 - 80564 | 15953.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 80864 - 80980 | Not Available |
| 3-hydroxybutyrate dehydrogenase | DV20_00395 | Not Available | Positive | 81736 - 82485 | 25722.8 |
| mfs transporter | DV20_00400 | Not Available | Positive | 82520 - 83845 | 46822.8 |
| diguanylate phosphodiesterase | DV20_00405 | Not Available | Positive | 83847 - 85700 | 64882.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.