Amycolatopsis rifamycinica str. DSM 46095

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis rifamycinica
StrainDSM 46095

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis rifamycinica strain DSM 46095 contig088, whole

Gene Summary

Adenine Count

1295651 bp

Thymine Count

1294980 bp

Guanine Count

3308542 bp

Cytosine Count

3303241 bp

Genome Length

9202418 bp

Protein-coding Genes

8307 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDV20_04410Not AvailablePositive888981 - 8891937644.95
diguanylate cyclaseDV20_04415Not AvailableNegative889198 - 89049045840.6
mfs transporterDV20_04420Not AvailableNegative890576 - 89179341296.3
Tmrna,resume consensus sequence (at 88): aataagcgccgactccagNot AvailableNot AvailablePositive892163 - 892528Not Available
hypothetical proteinDV20_04425Not AvailablePositive892677 - 89335124612.3
histidine kinaseDV20_04430Not AvailablePositive893348 - 89447840871.5
luxr family transcriptional regulatorDV20_04435Not AvailablePositive894518 - 89515922582.2
hypothetical proteinDV20_04440Not AvailablePositive895278 - 8955028351.84
acyltransferaseDV20_04445Not AvailablePositive895600 - 89690146179.8
hydrolaseDV20_04450Not AvailableNegative896944 - 89784332432.9

Displaying genes 871 – 880 of 8384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.