Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | DV20_04360 | Not Available | Negative | 877146 - 877367 | 7317.04 |
| phosphate transporter | DV20_04365 | Not Available | Negative | 877376 - 878503 | 38008.8 |
| acyltransferase | DV20_04370 | Not Available | Positive | 878698 - 880095 | 48189.5 |
| lipase | DV20_04375 | Not Available | Positive | 880241 - 881107 | 29376.0 |
| imidazolonepropionase | DV20_04380 | Not Available | Negative | 881091 - 882239 | 39385.6 |
| n-formimino-l-glutamate deiminase | DV20_04385 | Not Available | Negative | 882227 - 883477 | 44745.5 |
| allantoate amidohydrolase | DV20_04390 | Not Available | Negative | 883579 - 884775 | 41348.7 |
| urocanate hydratase | DV20_04395 | Not Available | Negative | 884772 - 886424 | 59662.6 |
| histidine ammonia-lyase | DV20_04400 | Not Available | Negative | 886424 - 887950 | 53067.9 |
| iclr family transcriptional regulator | DV20_04405 | Not Available | Positive | 888035 - 888817 | 27776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.