Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DV20_04310 | Not Available | Positive | 866395 - 867225 | 29324.8 |
| atp-dependent helicase | DV20_04315 | Not Available | Positive | 867222 - 869657 | 85576.6 |
| multidrug abc transporter atp-binding protein | DV20_04320 | Not Available | Positive | 869758 - 870672 | 31879.4 |
| hypothetical protein | DV20_04325 | Not Available | Positive | 870669 - 871454 | 26649.7 |
| tetr family transcriptional regulator | DV20_04330 | Not Available | Negative | 871792 - 872334 | 19112.9 |
| fad-dependent oxidoreductase | DV20_04335 | Not Available | Positive | 872385 - 873521 | 40274.4 |
| luxr family transcriptional regulator | DV20_04340 | Not Available | Negative | 873466 - 874140 | 22897.9 |
| histidine kinase | DV20_04345 | Not Available | Negative | 874137 - 875705 | 55326.8 |
| hypothetical protein | DV20_04350 | Not Available | Positive | 876212 - 876421 | 7555.04 |
| hypothetical protein | DV20_04355 | Not Available | Positive | 876418 - 877164 | 26970.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.