Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit a | DV20_04260 | Not Available | Positive | 856337 - 858820 | 89778.4 |
| hypothetical protein | DV20_04265 | Not Available | Negative | 858842 - 859081 | 9474.02 |
| 1,4-beta-xylanase | DV20_04270 | Not Available | Negative | 859208 - 860479 | 46002.9 |
| beta-glucosidase | DV20_04275 | Not Available | Negative | 860509 - 862338 | 65205.0 |
| hypothetical protein | DV20_04280 | Not Available | Negative | 862461 - 862964 | 18198.4 |
| hypothetical protein | DV20_04285 | Not Available | Negative | 862970 - 863350 | 13525.8 |
| hypothetical protein | DV20_04290 | Not Available | Negative | 863354 - 864481 | 38446.0 |
| hypothetical protein | DV20_04295 | Not Available | Negative | 864478 - 864819 | 11971.8 |
| membrane protein | DV20_04300 | Not Available | Negative | 864988 - 865734 | 26307.3 |
| doxx family protein | DV20_04305 | Not Available | Negative | 865801 - 866307 | 17333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.