Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase | DV20_03995 | Not Available | Negative | 798311 - 798796 | 18317.6 |
| dihydrodipicolinate reductase | DV20_04000 | Not Available | Negative | 798793 - 799872 | 37805.0 |
| dihydroxy-acid dehydratase | DV20_04005 | Not Available | Positive | 799986 - 801677 | 59051.0 |
| fatty acid--coa ligase | DV20_04010 | Not Available | Negative | 801656 - 803020 | 47948.5 |
| sporulation protein ssga | DV20_04015 | Not Available | Negative | 803034 - 803447 | 14785.2 |
| rna polymerase sigma factor sigk | DV20_04020 | Not Available | Positive | 803840 - 804436 | 22075.3 |
| hypothetical protein | DV20_04025 | Not Available | Positive | 804433 - 805113 | 23209.9 |
| fasciclin | DV20_04030 | Not Available | Positive | 805352 - 806023 | 21934.0 |
| luciferase | DV20_04035 | Not Available | Negative | 806024 - 807016 | 36563.2 |
| lipase | DV20_04045 | Not Available | Negative | 807328 - 808257 | 32445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.