Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | DV20_00320 | Not Available | Positive | 66700 - 67068 | 12567.8 |
| 50s ribosomal protein l36 | DV20_00325 | Not Available | Negative | 67164 - 67286 | 4548.6 |
| von willebrand factor a | DV20_00330 | Not Available | Negative | 67360 - 68610 | 44500.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 70422 - 70490 | Not Available |
| hypothetical protein | DV20_00335 | Not Available | Negative | 68607 - 70787 | 77677.8 |
| atpase | DV20_00340 | Not Available | Negative | 70784 - 71869 | 38571.0 |
| hypothetical protein | DV20_00345 | Not Available | Negative | 71866 - 73251 | 50197.4 |
| hypothetical protein | DV20_00350 | Not Available | Negative | 73454 - 74761 | 46117.9 |
| padr family transcriptional regulator | DV20_00355 | Not Available | Positive | 74925 - 75434 | 18217.8 |
| hypothetical protein | DV20_00360 | Not Available | Positive | 75434 - 76033 | 22770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.