Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyldihydroxyacetonephosphate synthase | DV20_03940 | Not Available | Positive | 788789 - 790207 | 49581.3 |
| hypothetical protein | DV20_03945 | Not Available | Negative | 790185 - 790739 | 19379.9 |
| alcohol dehydrogenase | DV20_03950 | Not Available | Negative | 790805 - 791902 | 38720.2 |
| hypothetical protein | DV20_03955 | Not Available | Negative | 792094 - 792310 | 7083.72 |
| transposase | DV20_03965 | Not Available | Positive | 793312 - 794271 | 36378.3 |
| cupin | DV20_03970 | Not Available | Negative | 794276 - 794578 | 10888.6 |
| rna polymerase sigma factor sigd | DV20_03975 | Not Available | Negative | 794595 - 795206 | 21827.4 |
| oxidoreductase | DV20_03980 | Not Available | Negative | 795210 - 795926 | 24925.0 |
| rna-binding protein s4 | DV20_03985 | Not Available | Negative | 796152 - 796505 | 13035.8 |
| cholesterol oxidase | DV20_03990 | Not Available | Positive | 796729 - 798282 | 55061.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.