Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DV20_03890 | Not Available | Positive | 779055 - 779996 | 32287.4 |
| hypothetical protein | DV20_03895 | Not Available | Positive | 780194 - 781510 | 48237.6 |
| deoxyribodipyrimidine photolyase | DV20_03900 | Not Available | Positive | 781572 - 782918 | 50473.9 |
| acetyltransferase | DV20_03905 | Not Available | Negative | 782908 - 783396 | 17304.5 |
| abc transporter permease | DV20_03910 | Not Available | Negative | 783389 - 784579 | 41731.5 |
| abc transporter atp-binding protein | DV20_03915 | Not Available | Negative | 784576 - 785517 | 33128.8 |
| hypothetical protein | DV20_03920 | Not Available | Negative | 785510 - 786049 | 20001.5 |
| xre family transcriptional regulator | DV20_03925 | Not Available | Negative | 786046 - 786315 | 9843.89 |
| glycerol-3-phosphate dehydrogenase | DV20_03930 | Not Available | Negative | 786392 - 787930 | 52925.7 |
| tetr family transcriptional regulator | DV20_03935 | Not Available | Negative | 787927 - 788490 | 20188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.