Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter permease | DV20_03835 | Not Available | Positive | 769679 - 770965 | 44804.1 |
| hypothetical protein | DV20_03840 | Not Available | Positive | 770989 - 771540 | 18404.9 |
| beta-lactamase | DV20_03845 | Not Available | Negative | 771591 - 772415 | 29633.3 |
| beta-lactamase | DV20_03850 | Not Available | Negative | 772412 - 773242 | 30573.4 |
| tetr family transcriptional regulator | DV20_03855 | Not Available | Negative | 773242 - 773820 | 20254.9 |
| aldose epimerase | DV20_03860 | Not Available | Positive | 773887 - 774792 | 32860.4 |
| amidohydrolase | DV20_03870 | Not Available | Positive | 775274 - 776491 | 43466.6 |
| hypothetical protein | DV20_03875 | Not Available | Negative | 776540 - 777085 | 19165.8 |
| acyl-coa dehydrogenase | DV20_03880 | Not Available | Negative | 777135 - 778271 | 40585.6 |
| tetr family transcriptional regulator | DV20_03885 | Not Available | Positive | 778432 - 779013 | 21041.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.