Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine aminotransferase | DV20_03730 | Not Available | Negative | 749559 - 750683 | 40004.9 |
| hypothetical protein | DV20_03735 | Not Available | Positive | 750743 - 751588 | 29744.4 |
| hypothetical protein | DV20_03740 | Not Available | Positive | 751642 - 751950 | 10536.7 |
| beta-lactamase | DV20_03745 | Not Available | Negative | 751996 - 753336 | 47377.4 |
| luxr family transcriptional regulator | DV20_03750 | Not Available | Negative | 753560 - 754180 | 21856.6 |
| histidine kinase | DV20_03755 | Not Available | Negative | 754177 - 755334 | 41226.8 |
| abc transporter | DV20_03760 | Not Available | Negative | 755331 - 756134 | 28221.4 |
| abc transporter | DV20_03765 | Not Available | Negative | 756200 - 757039 | 30132.8 |
| tetr family transcriptional regulator | DV20_03775 | Not Available | Positive | 758539 - 759126 | 21320.4 |
| citrate synthase 2 | DV20_03780 | Not Available | Negative | 759150 - 760298 | 41438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.