Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | DV20_03680 | Not Available | Positive | 739683 - 740033 | 13477.1 |
| dna-binding protein | DV20_03685 | Not Available | Negative | 740030 - 740875 | 31265.4 |
| histidine kinase | DV20_03690 | Not Available | Negative | 741068 - 742216 | 40662.1 |
| transcriptional regulator | DV20_03695 | Not Available | Negative | 742213 - 742875 | 23908.9 |
| hypothetical protein | DV20_03700 | Not Available | Positive | 742989 - 743537 | 18664.3 |
| peptidoglycan-binding protein | DV20_03705 | Not Available | Positive | 743534 - 744628 | 37225.4 |
| abc transporter atp-binding protein | DV20_03710 | Not Available | Positive | 744625 - 745311 | 24307.4 |
| abc transporter permease | DV20_03715 | Not Available | Positive | 745308 - 746513 | 40629.7 |
| amidohydrolase | DV20_03720 | Not Available | Positive | 746778 - 748301 | 54517.9 |
| hypothetical protein | DV20_03725 | Not Available | Positive | 748382 - 749566 | 41763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.