Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_03580 | Not Available | Negative | 718705 - 718941 | 8084.44 |
| cold-shock protein | DV20_03585 | Not Available | Positive | 719073 - 719459 | 14326.3 |
| hypothetical protein | DV20_03590 | Not Available | Negative | 719456 - 719932 | 16820.8 |
| hypothetical protein | DV20_03595 | Not Available | Negative | 719943 - 721823 | 65478.6 |
| glutaminyl-peptide cyclotransferase | DV20_03600 | Not Available | Negative | 721874 - 722641 | 26722.6 |
| hypothetical protein | DV20_03605 | Not Available | Positive | 722693 - 724645 | 64828.4 |
| molecular chaperone hsp90 | DV20_03610 | Not Available | Positive | 724642 - 727449 | 100370.0 |
| hypothetical protein | DV20_03615 | Not Available | Negative | 727453 - 727680 | 8008.03 |
| mfs transporter | DV20_03620 | Not Available | Positive | 727763 - 729232 | 50498.8 |
| hypothetical protein | DV20_03625 | Not Available | Negative | 729234 - 729797 | 19203.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.