Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+:solute symporter | DV20_00280 | Not Available | Positive | 55501 - 57009 | 54592.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | DV20_00285 | Not Available | Positive | 57061 - 57996 | 32351.8 |
| glucarate dehydratase | DV20_00290 | Not Available | Positive | 57996 - 59252 | 45301.1 |
| hypothetical protein | DV20_00295 | Not Available | Positive | 59257 - 60387 | 39343.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 59946 - 60014 | Not Available |
| aldehyde dehydrogenase | DV20_00300 | Not Available | Positive | 60403 - 61857 | 50541.9 |
| hyaluronate lyase | DV20_00305 | Not Available | Positive | 62034 - 64430 | 83906.9 |
| fad-containing monooxygenase etha | DV20_00310 | Not Available | Positive | 64498 - 65940 | 52503.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 65287 - 65361 | Not Available |
| hxlr family transcriptional regulator | DV20_00315 | Not Available | Negative | 65983 - 66612 | 22964.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.