Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | DV20_03270 | Not Available | Positive | 653288 - 654046 | 28511.3 |
| o-succinylbenzoate synthase | DV20_03275 | Not Available | Negative | 654031 - 654966 | 32498.9 |
| hypothetical protein | DV20_03280 | Not Available | Negative | 655010 - 655876 | 32784.9 |
| hypothetical protein | DV20_03285 | Not Available | Negative | 656515 - 657276 | 27640.9 |
| helicase | DV20_03295 | Not Available | Negative | 660835 - 662481 | 60938.7 |
| hypothetical protein | DV20_03300 | Not Available | Positive | 662571 - 663188 | 21693.9 |
| sulfonate abc transporter substrate-binding protein | DV20_03310 | Not Available | Negative | 664627 - 665592 | 32880.5 |
| histidine kinase | DV20_03315 | Not Available | Positive | 665779 - 668628 | 102467.0 |
| copper homeostasis protein cutc | DV20_03320 | Not Available | Positive | 668642 - 669319 | 23704.1 |
| hypothetical protein | DV20_03325 | Not Available | Positive | 669734 - 669946 | 6932.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.