Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_03170 | Not Available | Negative | 637063 - 637545 | 16942.2 |
| amidohydrolase | DV20_03175 | Not Available | Negative | 637988 - 638971 | 35729.4 |
| nadph-dependent fmn reductase | DV20_03180 | Not Available | Negative | 638968 - 639519 | 20111.7 |
| marr family transcriptional regulator | DV20_03185 | Not Available | Positive | 639598 - 640068 | 17698.1 |
| tetr family transcriptional regulator | DV20_03190 | Not Available | Negative | 640103 - 640699 | 21687.1 |
| alcohol dehydrogenase | DV20_03195 | Not Available | Positive | 640797 - 641732 | 32301.8 |
| tetr family transcriptional regulator | DV20_03200 | Not Available | Positive | 642006 - 642506 | 17140.3 |
| hypothetical protein | DV20_03205 | Not Available | Positive | 642528 - 642878 | 12448.1 |
| hypothetical protein | DV20_03210 | Not Available | Positive | 642887 - 643918 | 35678.2 |
| transglycosylase | DV20_03215 | Not Available | Negative | 643969 - 644217 | 8619.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.