Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_03020 | Not Available | Positive | 608740 - 609111 | 13235.0 |
| atp-binding protein | DV20_03025 | Not Available | Positive | 609128 - 609682 | 20179.6 |
| hypothetical protein | DV20_03030 | Not Available | Positive | 609995 - 610954 | 34965.2 |
| hypothetical protein | DV20_03035 | Not Available | Positive | 610965 - 611594 | 23778.9 |
| dna polymerase | DV20_03040 | Not Available | Positive | 611591 - 612412 | 29539.9 |
| rna polymerase sigma24 factor | DV20_03045 | Not Available | Negative | 612603 - 613487 | 32144.9 |
| tetr family transcriptional regulator | DV20_03050 | Not Available | Positive | 613676 - 614233 | 19581.5 |
| cupin | DV20_03055 | Not Available | Positive | 614251 - 614979 | 25791.4 |
| hypothetical protein | DV20_03060 | Not Available | Positive | 615243 - 617009 | 61988.6 |
| beta-xylosidase | DV20_03065 | Not Available | Positive | 617061 - 618497 | 51680.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.