Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 49853 - 49921 | Not Available |
| hypothetical protein | DV20_00240 | Not Available | Negative | 49495 - 50322 | 29779.3 |
| transcriptional regulator | DV20_00245 | Not Available | Negative | 50398 - 50976 | 19898.2 |
| histidine kinase | DV20_00250 | Not Available | Positive | 50999 - 51988 | 34719.0 |
| polysaccharide deacetylase | DV20_00255 | Not Available | Negative | 51930 - 52619 | 24906.7 |
| sigma-70 protein | DV20_00260 | Not Available | Positive | 52771 - 52980 | 7827.25 |
| peptidase | DV20_00265 | Not Available | Positive | 52980 - 53642 | 23326.4 |
| nad-dependent dehydratase | DV20_00270 | Not Available | Negative | 53712 - 54518 | 28308.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 54680 - 54748 | Not Available |
| iclr family transcriptional regulator | DV20_00275 | Not Available | Negative | 54544 - 55347 | 28867.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.