Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxylacyl-coa dehydrogenase | DV20_02865 | Not Available | Positive | 579344 - 580249 | 32561.7 |
| acyl-coa dehydrogenase | DV20_02870 | Not Available | Positive | 580251 - 581447 | 44064.7 |
| lyttr family transcriptional regulator | DV20_02875 | Not Available | Negative | 581457 - 582686 | 41193.8 |
| oxidoreductase | DV20_02880 | Not Available | Negative | 582895 - 583638 | 25912.5 |
| rna polymerase sigma70 factor | DV20_02885 | Not Available | Positive | 583679 - 584707 | 37801.8 |
| transcription factor whib | DV20_02890 | Not Available | Negative | 584846 - 585109 | 9401.15 |
| rna polymerase sigma factor | DV20_02895 | Not Available | Positive | 585648 - 586136 | 17941.3 |
| rna polymerase sigma70 factor | DV20_02900 | Not Available | Positive | 586133 - 586879 | 26910.1 |
| lysr family transcriptional regulator | DV20_02905 | Not Available | Negative | 586876 - 587709 | 30411.9 |
| membrane protein | DV20_02910 | Not Available | Positive | 587807 - 588781 | 33553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.