Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | DV20_02755 | Not Available | Negative | 562741 - 564231 | 53051.0 |
| membrane protein | DV20_02760 | Not Available | Negative | 564228 - 564725 | 17906.7 |
| hypothetical protein | DV20_02765 | Not Available | Negative | 564972 - 565613 | 22573.2 |
| histidine kinase | DV20_02770 | Not Available | Positive | 565772 - 567007 | 42872.6 |
| luxr family transcriptional regulator | DV20_02775 | Not Available | Positive | 566982 - 567632 | 22696.6 |
| membrane protein | DV20_02780 | Not Available | Negative | 567629 - 568336 | 24706.6 |
| hxlr family transcriptional regulator | DV20_02785 | Not Available | Negative | 568409 - 568780 | 13873.5 |
| hypothetical protein | DV20_02790 | Not Available | Negative | 568819 - 569244 | 15650.6 |
| tetr family transcriptional regulator | DV20_02795 | Not Available | Positive | 569268 - 569810 | 19511.2 |
| hypothetical protein | DV20_02800 | Not Available | Negative | 569916 - 570095 | 6897.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.