Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | DV20_02655 | Not Available | Positive | 542177 - 542872 | 24265.5 |
| hypothetical protein | DV20_02660 | Not Available | Positive | 542984 - 545110 | 76198.8 |
| hypothetical protein | DV20_02665 | Not Available | Negative | 545088 - 545762 | 25290.5 |
| hypothetical protein | DV20_02670 | Not Available | Negative | 545790 - 547055 | 44527.2 |
| hypothetical protein | DV20_02675 | Not Available | Positive | 547183 - 548355 | 40270.4 |
| hypothetical protein | DV20_02680 | Not Available | Negative | 548346 - 549197 | 29415.6 |
| prolyl-trna synthetase | DV20_02685 | Not Available | Negative | 549199 - 550947 | 63452.4 |
| glyoxalase | DV20_02690 | Not Available | Positive | 551071 - 551424 | 12659.2 |
| hypothetical protein | DV20_02695 | Not Available | Positive | 551670 - 553499 | 61360.6 |
| dihydrofolate reductase | DV20_02700 | Not Available | Positive | 553516 - 554418 | 32207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.