Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin reductase | DV20_02605 | Not Available | Positive | 533732 - 534799 | 38795.2 |
| fatty acid desaturase | DV20_02610 | Not Available | Positive | 534811 - 535917 | 41851.0 |
| hypothetical protein | DV20_02615 | Not Available | Positive | 535925 - 536125 | 7312.49 |
| histidine kinase | DV20_02620 | Not Available | Positive | 536524 - 537822 | 46298.5 |
| luxr family transcriptional regulator | DV20_02625 | Not Available | Positive | 537832 - 538476 | 23200.9 |
| transcriptional regulator | DV20_02630 | Not Available | Negative | 538461 - 539108 | 24138.9 |
| hypothetical protein | DV20_02635 | Not Available | Positive | 539162 - 539521 | 12918.2 |
| hypothetical protein | DV20_02640 | Not Available | Positive | 539518 - 540720 | 40704.3 |
| hypothetical protein | DV20_02645 | Not Available | Positive | 540731 - 541141 | 14599.3 |
| hypothetical protein | DV20_02650 | Not Available | Negative | 541079 - 542071 | 32984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.