Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | DV20_02555 | Not Available | Positive | 526034 - 526387 | 12757.6 |
| n-acetylmuramoyl-l-alanine amidase | DV20_02560 | Not Available | Negative | 526372 - 527232 | 28635.7 |
| hypothetical protein | DV20_02565 | Not Available | Positive | 527311 - 527670 | 11939.1 |
| recombinase recr | DV20_02570 | Not Available | Positive | 527676 - 528272 | 21792.5 |
| hypothetical protein | DV20_02575 | Not Available | Negative | 528316 - 529209 | 33150.1 |
| lipoate--protein ligase | DV20_02580 | Not Available | Negative | 529319 - 530050 | 25808.1 |
| nad(p) transhydrogenase subunit beta | DV20_02585 | Not Available | Negative | 530047 - 531435 | 47406.8 |
| nad(p) transhydrogenase subunit alpha | DV20_02590 | Not Available | Negative | 531432 - 531737 | 10487.3 |
| nad(p) transhydrogenase subunit alpha | DV20_02595 | Not Available | Negative | 531743 - 532855 | 38542.3 |
| tetr family transcriptional regulator | DV20_02600 | Not Available | Negative | 532978 - 533637 | 24502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.