Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m1 | DV20_00195 | Not Available | Positive | 40062 - 41471 | 52036.6 |
| hypothetical protein | DV20_00200 | Not Available | Positive | 41597 - 43888 | 83721.0 |
| peptidylprolyl isomerase | DV20_00205 | Not Available | Positive | 44020 - 44895 | 29390.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 44822 - 44896 | Not Available |
| hypothetical protein | DV20_00210 | Not Available | Positive | 44960 - 45709 | 26111.4 |
| hypothetical protein | DV20_00215 | Not Available | Positive | 45807 - 46250 | 14893.8 |
| phthalate 4,5-dioxygenase | DV20_00220 | Not Available | Negative | 46255 - 47127 | 31321.6 |
| flavin-nucleotide-binding protein | DV20_00225 | Not Available | Negative | 47129 - 47749 | 22630.2 |
| tetr family transcriptional regulator | DV20_00230 | Not Available | Positive | 47806 - 48423 | 22996.7 |
| hypothetical protein | DV20_00235 | Not Available | Negative | 48468 - 49466 | 37737.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.