Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_02405 | Not Available | Positive | 493427 - 493786 | 13273.6 |
| hypothetical protein | DV20_02410 | Not Available | Positive | 493822 - 494988 | 41996.3 |
| excisionase | DV20_02415 | Not Available | Positive | 495309 - 495608 | 10212.3 |
| integrase | DV20_02420 | Not Available | Positive | 495622 - 496980 | 51666.3 |
| Trna-ser | Not Available | Not Available | Positive | 497069 - 497156 | Not Available |
| protein phosphatase | DV20_02430 | Not Available | Negative | 497201 - 497944 | 26166.0 |
| sam-dependent methyltransferase | DV20_02435 | Not Available | Positive | 498022 - 499716 | 60586.1 |
| protein kinase | DV20_02440 | Not Available | Positive | 499725 - 500615 | 31809.9 |
| hypothetical protein | DV20_02445 | Not Available | Positive | 500755 - 501399 | 21057.1 |
| sugar dehydrogenase | DV20_02450 | Not Available | Positive | 501510 - 504482 | 104115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.