Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 463809 - 463896 | Not Available |
| hypothetical protein | DV20_02245 | Not Available | Negative | 463986 - 464960 | 35748.9 |
| hypothetical protein | DV20_02250 | Not Available | Positive | 465119 - 465733 | 21968.7 |
| cation tolerance protein cuta | DV20_02255 | Not Available | Negative | 465668 - 466009 | 12252.3 |
| hypothetical protein | DV20_02260 | Not Available | Positive | 466101 - 466364 | 9594.1 |
| nucleoside-diphosphate sugar epimerase | DV20_02270 | Not Available | Positive | 467579 - 468361 | 27817.0 |
| hypothetical protein | DV20_02275 | Not Available | Negative | 468354 - 468926 | 18715.8 |
| hypothetical protein | DV20_02280 | Not Available | Negative | 468923 - 469309 | 13391.7 |
| taurine dioxygenase | DV20_02290 | Not Available | Positive | 469600 - 470520 | 34905.2 |
| limonene-1,2-epoxide hydrolase | DV20_02295 | Not Available | Positive | 470558 - 470983 | 15525.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.