Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DV20_02190 | Not Available | Positive | 455018 - 455845 | 29615.1 |
| merr family transcriptional regulator | DV20_02195 | Not Available | Positive | 455952 - 456794 | 30278.0 |
| threonyl-trna synthetase | DV20_02200 | Not Available | Negative | 456724 - 457941 | 44377.1 |
| deaminase/reductase | DV20_02205 | Not Available | Negative | 458101 - 458724 | 22849.1 |
| hypothetical protein | DV20_02210 | Not Available | Negative | 458801 - 459268 | 17003.1 |
| phospholipase c | DV20_02215 | Not Available | Positive | 459355 - 461301 | 70699.0 |
| amidohydrolase | DV20_02220 | Not Available | Negative | 461298 - 462527 | 43245.8 |
| trna adenosine deaminase | DV20_02225 | Not Available | Positive | 462605 - 463087 | 17177.2 |
| cmp deaminase | DV20_02230 | Not Available | Positive | 463111 - 463539 | 14911.1 |
| general stress protein csbd | DV20_02235 | Not Available | Positive | 463560 - 463775 | 7849.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.