Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | DV20_02140 | Not Available | Negative | 444709 - 445185 | 17481.0 |
| amino acid transporter | DV20_02145 | Not Available | Positive | 445465 - 447015 | 53546.7 |
| diaminopimelate decarboxylase | DV20_02150 | Not Available | Negative | 446993 - 448336 | 47607.0 |
| hypothetical protein | DV20_02155 | Not Available | Negative | 448568 - 448750 | 6203.19 |
| delta fatty acid desaturase | DV20_02160 | Not Available | Negative | 448747 - 449778 | 38450.7 |
| dihydrodipicolinate synthase | DV20_02165 | Not Available | Negative | 450253 - 451158 | 31826.0 |
| gntr family transcriptional regulator | DV20_02170 | Not Available | Negative | 451155 - 451790 | 22568.9 |
| abc transporter substrate-binding protein | DV20_02175 | Not Available | Positive | 451892 - 453085 | 42785.2 |
| spermidine/putrescine abc transporter atp-binding protein | DV20_02180 | Not Available | Positive | 453082 - 454131 | 37836.9 |
| abc transporter permease | DV20_02185 | Not Available | Positive | 454128 - 455021 | 31961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.