Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | DV20_01930 | Not Available | Negative | 405258 - 406190 | 31503.1 |
| aerial mycelium formation protein | DV20_01935 | Not Available | Negative | 406187 - 406747 | 20398.9 |
| glycine cleavage system protein t | DV20_01940 | Not Available | Negative | 406797 - 407927 | 40154.6 |
| 4-amino-4-deoxychorismate lyase | DV20_01945 | Not Available | Positive | 407960 - 408808 | 30035.2 |
| hypothetical protein | DV20_01950 | Not Available | Negative | 408787 - 409212 | 15316.2 |
| allophanate hydrolase | DV20_01955 | Not Available | Negative | 409311 - 410141 | 27851.5 |
| allophanate hydrolase | DV20_01960 | Not Available | Negative | 410153 - 410749 | 20991.1 |
| fatty acid-binding protein | DV20_01965 | Not Available | Negative | 410754 - 411368 | 22554.5 |
| hypothetical protein | DV20_01975 | Not Available | Negative | 411599 - 411910 | 10332.9 |
| thiosulfate sulfurtransferase | DV20_01980 | Not Available | Negative | 411910 - 412746 | 31485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.