Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter trka | DV20_00160 | Not Available | Negative | 31343 - 31825 | 16606.9 |
| hypothetical protein | DV20_00165 | Not Available | Negative | 31862 - 32230 | 12782.2 |
| tetr family transcriptional regulator | DV20_00170 | Not Available | Positive | 32342 - 32887 | 19513.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 32399 - 32467 | Not Available |
| cytidylate kinase | DV20_00175 | Not Available | Positive | 32979 - 33683 | 24286.8 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | DV20_00180 | Not Available | Positive | 33680 - 34339 | 23436.7 |
| gtp-binding protein der | DV20_00185 | Not Available | Positive | 34356 - 35816 | 52340.5 |
| amino acid adenylation protein | DV20_00190 | Not Available | Positive | 36106 - 39981 | 135705.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 37091 - 37159 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 40010 - 40078 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.