Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | DV20_01880 | Not Available | Positive | 395919 - 396335 | 14886.7 |
| hypothetical protein | DV20_01885 | Not Available | Negative | 396332 - 397069 | 26056.1 |
| dehydrogenase | DV20_01890 | Not Available | Negative | 397364 - 398272 | 31337.4 |
| hypothetical protein | DV20_01895 | Not Available | Positive | 398351 - 398974 | 20288.2 |
| cobalt abc transporter permease | DV20_01900 | Not Available | Positive | 398964 - 400025 | 37374.6 |
| cobalt abc transporter atp-binding protein | DV20_01905 | Not Available | Positive | 400022 - 401620 | 55489.9 |
| abc transporter permease | DV20_01910 | Not Available | Positive | 402038 - 402859 | 28484.5 |
| 3-hydroxybutyryl-coa dehydrogenase | DV20_01915 | Not Available | Negative | 402850 - 403668 | 29560.7 |
| hypothetical protein | DV20_01920 | Not Available | Negative | 403826 - 404020 | 7525.32 |
| hypothetical protein | DV20_01925 | Not Available | Positive | 404228 - 405124 | 32876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.