Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | DV20_01830 | Not Available | Negative | 387331 - 388200 | 31535.4 |
| membrane protein | DV20_01835 | Not Available | Negative | 388393 - 389193 | 28364.9 |
| hypothetical protein | DV20_01840 | Not Available | Negative | 389298 - 389996 | 25474.1 |
| hypothetical protein | DV20_01845 | Not Available | Positive | 390104 - 390439 | 11936.3 |
| hypothetical protein | DV20_01850 | Not Available | Negative | 390456 - 391253 | 29771.2 |
| xre family transcriptional regulator | DV20_01855 | Not Available | Positive | 391454 - 392332 | 33534.4 |
| hypothetical protein | DV20_01860 | Not Available | Positive | 392594 - 392833 | 8404.82 |
| hypothetical protein | DV20_01865 | Not Available | Positive | 392820 - 393125 | 11186.2 |
| amidophosphoribosyltransferase | DV20_01870 | Not Available | Positive | 393245 - 394771 | 54177.6 |
| phosphoribosylaminoimidazole synthetase | DV20_01875 | Not Available | Positive | 394800 - 395870 | 37283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.