Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | DV20_01780 | Not Available | Positive | 374239 - 375735 | 52553.7 |
| choline dehydrogenase | DV20_01785 | Not Available | Negative | 375732 - 377306 | 56981.5 |
| phosphoribosylformylglycinamidine synthase | DV20_01790 | Not Available | Positive | 377462 - 377701 | 8603.32 |
| phosphoribosylformylglycinamidine synthase | DV20_01795 | Not Available | Positive | 377698 - 378375 | 24036.7 |
| pyridoxamine 5'-phosphate oxidase | DV20_01800 | Not Available | Negative | 378468 - 378896 | 15917.8 |
| multidrug abc transporter atpase | DV20_01805 | Not Available | Negative | 378962 - 380707 | 61742.0 |
| multidrug abc transporter permease | DV20_01810 | Not Available | Negative | 380704 - 382338 | 56932.2 |
| phosphoribosylglycinamide synthetase | DV20_01815 | Not Available | Positive | 382768 - 385050 | 80645.6 |
| hypothetical protein | DV20_01820 | Not Available | Negative | 385169 - 386272 | 40899.4 |
| hypothetical protein | DV20_01825 | Not Available | Negative | 386277 - 387158 | 30354.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.