Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | DV20_01680 | Not Available | Positive | 356944 - 357540 | 21345.7 |
| gntr family transcriptional regulator | DV20_01685 | Not Available | Negative | 357546 - 358247 | 25417.3 |
| hypothetical protein | DV20_01690 | Not Available | Negative | 358308 - 359312 | 34325.2 |
| short-chain dehydrogenase | DV20_01695 | Not Available | Positive | 359446 - 360123 | 23368.7 |
| galactonate dehydratase | DV20_01700 | Not Available | Positive | 360137 - 361282 | 41392.2 |
| adenylosuccinate lyase | DV20_01705 | Not Available | Positive | 361329 - 362756 | 52462.0 |
| abc transporter substrate-binding protein | DV20_01710 | Not Available | Positive | 362908 - 363732 | 28501.8 |
| abc transporter substrate-binding protein | DV20_01715 | Not Available | Positive | 363734 - 364498 | 26730.8 |
| abc transporter substrate-binding protein | DV20_01720 | Not Available | Positive | 364506 - 365285 | 27126.8 |
| amino acid abc transporter permease | DV20_01725 | Not Available | Positive | 365292 - 366056 | 27458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.