Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_01630 | Not Available | Positive | 349177 - 349935 | 27293.3 |
| hypothetical protein | DV20_01635 | Not Available | Positive | 350069 - 350380 | 11101.1 |
| transglycosylase | DV20_01640 | Not Available | Positive | 350397 - 351542 | 39124.3 |
| aspartate aminotransferase | DV20_01645 | Not Available | Positive | 351552 - 352733 | 41881.5 |
| hypothetical protein | DV20_01650 | Not Available | Positive | 352839 - 353030 | 6857.81 |
| hypothetical protein | DV20_01655 | Not Available | Negative | 353032 - 353847 | 29528.1 |
| had family hydrolase | DV20_01660 | Not Available | Negative | 353936 - 354514 | 20889.5 |
| threonine aldolase | DV20_01665 | Not Available | Negative | 354532 - 355554 | 35494.6 |
| rna polymerase sigma24 factor | DV20_01670 | Not Available | Positive | 355691 - 356200 | 19338.8 |
| hypothetical protein | DV20_01675 | Not Available | Positive | 356193 - 356909 | 23702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.