Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerd | DV20_00110 | Not Available | Positive | 21957 - 22859 | 32106.4 |
| hypothetical protein | DV20_00115 | Not Available | Positive | 23007 - 23978 | 34705.8 |
| cobyrinic acid a,c-diamide synthase | DV20_00120 | Not Available | Positive | 23975 - 24406 | 15038.7 |
| chromosome segregation protein scpa | DV20_00125 | Not Available | Positive | 24406 - 25308 | 33380.7 |
| s-(hydroxymethyl)glutathione dehydrogenase | DV20_00130 | Not Available | Positive | 25305 - 26237 | 32981.4 |
| pseudouridine synthase | DV20_00135 | Not Available | Positive | 26224 - 26976 | 27660.5 |
| methyltransferase | DV20_00140 | Not Available | Negative | 26955 - 27797 | 29275.9 |
| x-prolyl-dipeptidyl aminopeptidase | DV20_00145 | Not Available | Positive | 27876 - 29705 | 63408.8 |
| hypothetical protein | DV20_00150 | Not Available | Positive | 29807 - 30148 | 11510.8 |
| potassium transporter | DV20_00155 | Not Available | Negative | 30136 - 31335 | 40635.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.