Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DV20_01370 | Not Available | Negative | 293237 - 294142 | 33023.7 |
| Trna-ala | Not Available | Not Available | Positive | 295183 - 295255 | Not Available |
| hypothetical protein | DV20_01380 | Not Available | Positive | 295541 - 297694 | 76231.5 |
| membrane protein | DV20_01385 | Not Available | Positive | 297844 - 298398 | 19175.6 |
| ribonuclease z | DV20_01390 | Not Available | Positive | 298412 - 299326 | 33701.0 |
| chemotaxis protein chey | DV20_01395 | Not Available | Positive | 299349 - 301001 | 59341.1 |
| histidine kinase | DV20_01400 | Not Available | Positive | 300998 - 302419 | 52605.4 |
| carboxylesterase | DV20_01405 | Not Available | Positive | 302419 - 303912 | 53141.3 |
| hypothetical protein | DV20_01410 | Not Available | Negative | 304046 - 304873 | 30161.6 |
| hypothetical protein | DV20_01415 | Not Available | Negative | 304950 - 305204 | 8944.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.