Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_01310 | Not Available | Positive | 281055 - 283862 | 101807.0 |
| hypothetical protein | DV20_01320 | Not Available | Positive | 284930 - 285481 | 19222.0 |
| hypothetical protein | DV20_01325 | Not Available | Positive | 285497 - 285820 | 11651.9 |
| kinase inhibitor | DV20_01330 | Not Available | Negative | 285889 - 286428 | 18395.4 |
| gntr family transcriptional regulator | DV20_01335 | Not Available | Positive | 286547 - 287209 | 24671.3 |
| fumarylacetoacetate hydrolase | DV20_01340 | Not Available | Positive | 287209 - 288051 | 29660.4 |
| cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | DV20_01350 | Not Available | Positive | 288183 - 288968 | 26504.4 |
| oxidoreductase | DV20_01355 | Not Available | Negative | 289416 - 291536 | 75432.4 |
| molybdopterin dehydrogenase | DV20_01360 | Not Available | Negative | 291533 - 292528 | 35117.9 |
| (2fe-2s)-binding protein | DV20_01365 | Not Available | Negative | 292525 - 293064 | 18913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.