Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | DV20_01255 | Not Available | Positive | 268932 - 269720 | 27512.6 |
| esterase | DV20_01260 | Not Available | Positive | 269734 - 270732 | 35308.9 |
| hypothetical protein | DV20_01265 | Not Available | Negative | 270865 - 272271 | 47470.9 |
| hypothetical protein | DV20_01270 | Not Available | Negative | 272252 - 272881 | 22600.7 |
| cytochrome p450 | DV20_01275 | Not Available | Negative | 272926 - 274191 | 48442.1 |
| hypothetical protein | DV20_01280 | Not Available | Negative | 274202 - 275191 | 36162.9 |
| hypothetical protein | DV20_01285 | Not Available | Negative | 275470 - 276315 | 29286.0 |
| tetr family transcriptional regulator | DV20_01290 | Not Available | Negative | 277931 - 278521 | 21137.7 |
| amidohydrolase | DV20_01295 | Not Available | Positive | 278584 - 279624 | 34908.1 |
| hypothetical protein | DV20_01305 | Not Available | Negative | 280612 - 280818 | 7636.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.