Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_01205 | Not Available | Negative | 261530 - 261802 | 9886.94 |
| hypothetical protein | DV20_01210 | Not Available | Negative | 261870 - 262133 | 9077.4 |
| hypothetical protein | DV20_01215 | Not Available | Positive | 262359 - 262655 | 10635.6 |
| hydrolase | DV20_01220 | Not Available | Negative | 262707 - 264140 | 50464.3 |
| abc transporter permease | DV20_01225 | Not Available | Negative | 264168 - 264887 | 24915.2 |
| abc transporter atpase | DV20_01230 | Not Available | Negative | 264899 - 265783 | 31779.8 |
| histidine kinase | DV20_01235 | Not Available | Positive | 265891 - 267033 | 41676.6 |
| luxr family transcriptional regulator | DV20_01240 | Not Available | Positive | 267030 - 267632 | 21934.5 |
| merr family transcriptional regulator | DV20_01245 | Not Available | Negative | 267667 - 268461 | 28591.1 |
| hypothetical protein | DV20_01250 | Not Available | Positive | 268540 - 268902 | 13378.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.