Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_01105 | Not Available | Positive | 243111 - 243497 | 13695.7 |
| hypothetical protein | DV20_01110 | Not Available | Positive | 243570 - 244805 | 44647.8 |
| hypothetical protein | DV20_01115 | Not Available | Positive | 244810 - 245982 | 43316.5 |
| hypothetical protein | DV20_01120 | Not Available | Positive | 246032 - 246865 | 29476.9 |
| cupin | DV20_01125 | Not Available | Positive | 246955 - 247323 | 13271.9 |
| lysr family transcriptional regulator | DV20_01130 | Not Available | Positive | 247320 - 248054 | 25283.2 |
| rna polymerase sigma24 factor | DV20_01135 | Not Available | Negative | 248103 - 248996 | 32018.0 |
| hypothetical protein | DV20_01140 | Not Available | Positive | 249122 - 250144 | 37121.8 |
| pa-phosphatase | DV20_01145 | Not Available | Positive | 250271 - 251542 | 43806.6 |
| hxlr family transcriptional regulator | DV20_01150 | Not Available | Negative | 251558 - 251929 | 13779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.