Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase | DV20_01055 | Not Available | Positive | 232396 - 235140 | 97137.9 |
| acetyltransferase | DV20_01060 | Not Available | Negative | 235269 - 235856 | 22347.4 |
| alkylhydroperoxidase | DV20_01065 | Not Available | Positive | 236004 - 236495 | 17441.7 |
| hypothetical protein | DV20_01070 | Not Available | Negative | 236453 - 236689 | 7438.14 |
| hypothetical protein | DV20_01075 | Not Available | Negative | 236871 - 237224 | 12486.3 |
| aldehyde dehydrogenase | DV20_01080 | Not Available | Negative | 237221 - 238675 | 51404.1 |
| tetr family transcriptional regulator | DV20_01085 | Not Available | Positive | 238806 - 239363 | 20466.4 |
| carbohydrate-binding protein | DV20_01090 | Not Available | Negative | 239430 - 240884 | 50950.3 |
| cellulose-binding protein | DV20_01095 | Not Available | Negative | 241056 - 241718 | 24270.3 |
| f420-dependent oxidoreductase | DV20_01100 | Not Available | Negative | 241968 - 242861 | 31797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.