Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_01005 | Not Available | Negative | 222155 - 222352 | 6723.42 |
| luxr family transcriptional regulator | DV20_01010 | Not Available | Negative | 222424 - 223080 | 23460.6 |
| histidine kinase | DV20_01015 | Not Available | Negative | 223068 - 224267 | 41810.8 |
| abc transporter | DV20_01020 | Not Available | Positive | 224390 - 225124 | 26049.6 |
| abc transporter permease | DV20_01025 | Not Available | Positive | 225127 - 227658 | 85696.6 |
| 1,4-beta-xylanase | DV20_01030 | Not Available | Positive | 227798 - 228463 | 24144.8 |
| xylanase deacetylase | DV20_01035 | Not Available | Positive | 228466 - 229128 | 22931.1 |
| luxr family transcriptional regulator | DV20_01040 | Not Available | Positive | 229253 - 229906 | 22451.1 |
| abc transporter | DV20_01045 | Not Available | Positive | 230154 - 231068 | 31371.2 |
| abc transporter permease | DV20_01050 | Not Available | Positive | 231065 - 232390 | 45981.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.