Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_00720 | Not Available | Negative | 148030 - 148308 | 9616.95 |
| membrane protein | DV20_00725 | Not Available | Positive | 148744 - 149685 | 33618.6 |
| hypothetical protein | DV20_00730 | Not Available | Negative | 149690 - 149890 | 7206.14 |
| hypothetical protein | DV20_00735 | Not Available | Negative | 149957 - 150379 | 15598.0 |
| hydrolase nlp/p60 | DV20_00740 | Not Available | Negative | 150441 - 151490 | 35665.0 |
| peptidoglycan-binding protein | DV20_00745 | Not Available | Positive | 151943 - 152773 | 28791.8 |
| 5,10-methylene tetrahydromethanopterin reductase | DV20_00750 | Not Available | Positive | 152858 - 153676 | 28988.6 |
| threonine dehydratase | DV20_00755 | Not Available | Negative | 153618 - 154571 | 32278.5 |
| lysr family transcriptional regulator | DV20_00760 | Not Available | Positive | 154657 - 155538 | 31763.7 |
| lysr family transcriptional regulator | DV20_00765 | Not Available | Negative | 155546 - 156469 | 32608.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.