Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase | DV20_00665 | Not Available | Positive | 137210 - 137929 | 26261.9 |
| carbohydrate kinase | DV20_00670 | Not Available | Positive | 137907 - 138776 | 29188.9 |
| oxidoreductase | DV20_00675 | Not Available | Negative | 138786 - 139505 | 25062.9 |
| short-chain dehydrogenase | DV20_00680 | Not Available | Negative | 139502 - 140368 | 30349.0 |
| xre family transcriptional regulator | DV20_00685 | Not Available | Negative | 140413 - 141234 | 29937.7 |
| phosphodiesterase | DV20_00690 | Not Available | Negative | 141289 - 142860 | 58574.9 |
| glycosyl hydrolase | DV20_00695 | Not Available | Positive | 143010 - 145274 | 79955.9 |
| hypothetical protein | DV20_00700 | Not Available | Positive | 145348 - 145560 | 8004.33 |
| anti-sigma regulatory factor | DV20_00705 | Not Available | Negative | 145991 - 146407 | 14889.6 |
| transcription termination factor rho | DV20_00710 | Not Available | Positive | 146755 - 147816 | 38014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.